STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB28865.1Hypothetical small protein. (60 aa)    
Predicted Functional Partners:
yrkL
Putative NAD(P)H oxidoreductase.
 
     0.916
fliL
Flagellar basal body-associated protein Fl iL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.735
AEB30641.1
Hypothetical protein.
  
     0.733
AEB30666.1
Hypothetical protein.
  
     0.731
ylxG
Putative flagellar hook assembly protein.
  
     0.724
AEB28863.1
Hypothetical protein.
 
     0.704
fliJ
Flagellar export protein FliJ.
  
     0.649
AEB30752.1
Conserved hypothetical protein.
  
     0.610
AEB29900.1
Hypothetical protein.
  
     0.568
AEB28994.1
Hypothetical protein.
  
     0.491
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.