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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB29063.1Osmoprotectant transport system permease protein; Putative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits. (505 aa)    
Predicted Functional Partners:
gshR
Putative glycine betaine/carnitine/choline ABC transporter, ATP-binding subunit.
 0.999
opuCA
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA.
 0.999
opuCC
Glycine betaine/carnitine/choline-binding protein.
 
 
0.965
opuCB
Glycine betaine/carnitine/choline transport system permease protein OpuCB.
 
 
0.964
opuCD
Glycine betaine/carnitine/choline transport system permease protein OpuCD.
 
 
0.960
yjbP
Bis(5'-nucleosyl)-tetraphosphatase PrpE.
       0.650
opuAC1
Glycine betaine-binding protein; Glycine betaine ABC transporter.
 
 
 0.625
opuAC2
Glycine betaine-binding protein; Glycine betaine ABC transporter.
 
 
 0.625
AEB29064.1
Mannose PTS, EII.
       0.573
adhE
Bifunctional enzyme: alcohol dehydrogenase, acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.547
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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