STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yobOPre-neck appendage protein. (473 aa)    
Predicted Functional Partners:
yycN
Putative N-acetyltransferase.
  
    0.761
AEB30177.1
Collagen adhesion protein.
  
 
 0.695
tagF
CDP-glycerolpolyglycerol phosphate glycero-phosphotransferase; RBL05031.
 
     0.690
eag
Putative small membrane protein.
  
     0.687
ydcK
Hypothetical protein.
       0.677
AEB30171.1
Hypothetical protein.
 
 
 0.666
ycbP
Putative inner integral membrane protein.
  
     0.584
AEB31028.1
Hypothetical protein.
  
     0.584
ylbC
Hypothetical protein.
 
    0.541
AEB29488.1
Hypothetical protein.
  
     0.538
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.