STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjMTranscriptional regulator of the ntd operon; LacI family. (323 aa)    
Predicted Functional Partners:
ganR
Transcriptional regulator; LacI family.
  
     0.760
licH
6-phospho-beta-glucosidase.
       0.496
yvoA
Transcriptional regulator; GntR family.
  
     0.449
gmuR2
HTH-type transcriptional regulator GmuR; GntR family.
  
     0.438
gmuR1
HTH-type transcriptional regulator GmuR.
  
     0.429
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.427
AEB30833.1
Transcriptional regulatory protein.
  
     0.414
ptsH
Phosphocarrier protein HPr.
   
 
 0.408
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.