STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lplCProtein LplC. (301 aa)    
Predicted Functional Partners:
yesP
Rhamnogalacturonan permease.
 
 0.979
fbpC
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
 
 
 0.978
AEB29199.1
Extracellular solute-binding protein family 1.
 
 0.965
msmX
Multiple sugar-binding transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.916
yurN
Putative ABC transporter permease protein YurN.
 
 
 0.911
frlN
Putative fructose-amino acid permease.
 
 0.911
lacF
Lactose transport system permease protein LacF.
 
 0.910
AEB30122.1
Hypothetical protein.
 
 
 0.871
AEB29200.1
Metallo-beta-lactamase family protein.
 
     0.786
AEB30805.1
Hypothetical protein.
  
 
 0.757
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.