close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB29205.1ABC transporter, ATP-binding protein. (304 aa)    
Predicted Functional Partners:
AEB29206.1
Transporter.
 
  
 0.982
yfiN
Putative ABC transporter; Permease.
 
  
 0.744
yhcF
Putative transcriptional regulator; GntR family.
 
  
 0.697
ybxA
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.658
yhcI
Putative ABC transporter; Permease.
  
 
 0.619
capA
PGA biosynthesis protein CapA.
  
    0.606
peb1C
Putative ABC transporter ATP-binding protein PEB1C.
 
     
0.509
AEB29207.1
Transcriptional regulatory protein.
 
     0.494
yhfI
Putative metal-dependent hydrolase.
 
    0.444
psd
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
 
 
   0.430
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.