STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB29229.1Hypothetical protein. (550 aa)    
Predicted Functional Partners:
AEB29230.1
ABC transporter, ATP-binding protein.
 
     0.943
AEB28863.1
Hypothetical protein.
  
     0.630
yvdJ
Putative component of transporter.
  
     0.602
AEB29233.1
Hypothetical protein.
 
     0.536
AEB28773.1
Hypothetical protein, DUF948 family of general stress response.
  
     0.488
AEB30868.1
Conserved hypothetical protein.
 
     0.482
yrhK
Hypothetical protein.
  
     0.467
AEB29231.1
Putative lipase/esterase precursor.
       0.458
AEB29232.1
Hypothetical protein.
       0.445
AEB30139.1
Transcriptional regulator, XRE family.
  
     0.430
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.