STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB29253.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
AEB29347.1
Conserved hypothetical protein.
  
     0.763
AEB28961.1
Hypothetical extracellular protein precursor.
  
     0.755
AEB28772.1
Hypothetical protein.
  
     0.715
bdbD
Thiol-disulfide oxidoreductase.
  
     0.710
yugI
General stress protein 13.
  
    0.701
AEB29488.1
Hypothetical protein.
  
     0.697
yesJ
Putative acetyltransferase.
 
     0.682
ysoA
Putative hydrolase.
  
     0.682
yvlB
Hypothetical protein.
  
     0.673
dnaB
Replication initiation and membrane attachment protein.
  
     0.637
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.