STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB29279.1Hypothetical protein. (599 aa)    
Predicted Functional Partners:
AEB30728.1
Ser/Thr protein phosphatase family protein.
  
   
 0.587
fliJ
Flagellar export protein FliJ.
  
     0.548
AEB30702.1
Hypothetical protein.
  
     0.541
yokF
SPbeta phage DNA nuclease, lipoprotein.
   
  
 0.532
pdaA
Putative polysaccharide deacetylase.
 
  
 0.526
AEB28965.1
Hypothetical protein.
  
     0.525
AEB30703.1
Alcohol acetyltransferase.
  
     0.497
AEB30752.1
Conserved hypothetical protein.
 
     0.495
ywjD
Putative UV damage endonuclease.
 
     0.479
ywcJ
Formate/nitrite transporter.
       0.478
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.