Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pgsACDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (180 aa)    
Predicted Functional Partners:
ymfM
Hypothetical protein.
  
    0.971
cdsA1
Phosphatidate cytidylyltransferase; CDP-diglyceride synthase; Belongs to the CDS family.
 
 
 0.967
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
  
 0.961
AEB29990.1
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 
0.925
pssA
Phosphatidylserine synthase.
  
 
 0.921
pgpA
Phosphatidylglycerophosphatase A.
 
  
 0.750
clsA
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
  
 0.717
mreD
Rod shape-determining protein MreD.
  
  
 0.691
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.638
psd
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
   
 
 0.625
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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