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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntDManganese transport system membrane protein MntD. (304 aa)    
Predicted Functional Partners:
mntB
Manganese transport system ATP-binding protein MntB.
 
 0.999
mntA
Manganese transport system ATP-binding protein MntA; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
mntC
Manganese transport system membrane protein MntC.
 
  
 
0.972
mntR
Manganese transport transcriptional regulator.
  
 0.944
adcA1
Zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family.
  
 0.880
adcA2
Putative Zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.872
adcC
Zinc transport system ATP-binding protein AdcC; ATP-binding protein.
 
 
 0.854
adcB
Zinc transport system permease protein AdcB; Permease.
 
  
  0.741
yrpE
Putative lipoprotein.
  
  
 0.652
yaaA
Putative RNA binding protein.
  
    0.477
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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