STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yheAHypothetical protein; Belongs to the UPF0342 family. (114 aa)    
Predicted Functional Partners:
yhaN
Putative ATPase involved in DNA metabolism.
 
     0.745
yhaO
Putative exonuclease.
 
     0.699
yhaM
3'-5' exoribonuclease YhaM.
 
    0.663
pbpF
Penicillin-binding protein 2C required for spore germination.
       0.619
yneF
Hypothetical protein.
  
    0.598
ylbG
Hypothetical protein.
 
    0.525
ykuJ
Hypothetical protein.
   
    0.482
yrzB
Hypothetical protein; Belongs to the UPF0473 family.
 
     0.461
ytgP
Putative enzyme involved in polysaccharide biosynthesis.
  
     0.454
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.433
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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