STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppBOligopeptide ABC transporter; Permease. (315 aa)    
Predicted Functional Partners:
oppC
Oligopeptide ABC transporter; Permease.
 
 0.997
oppD1
Oligopeptide transport ATP-binding protein OppD; ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.996
oppF1
Oligopeptide transport ATP-binding protein OppF; ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
oppD2
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 0.987
oppF2
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.980
appC
Oligopeptide ABC transporter; Permease.
  
 0.948
oppA1
Periplasmic oligopeptide-binding protein; Binding lipo protein.
  
 0.868
dppE5
Dipeptide-binding protein DppE.
  
 0.851
dppE1
Dipeptide-binding protein DppE.
 
  
 0.850
dppE2
Dipeptide-binding protein DppE.
  
 0.850
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.