STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minDSeptum site-determining protein MinD. (264 aa)    
Predicted Functional Partners:
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
 
 
 0.999
mreD
Rod shape-determining protein MreD.
 
  
 0.957
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
    0.946
mreB
Rod shape-determining protein MreB.
 
 
 0.783
minJ
Topological determinant of cell division.
  
     0.647
mbl
Rod shape-determining protein Mbl.
 
 
 0.586
divIVA
Cell-division initiation protein.
 
    0.449
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
  
 0.445
AEB29541.1
Putative amino acid ABC transporter, substrate-binding lipoprotein precursor; Belongs to the bacterial solute-binding protein 3 family.
       0.431
rpmA
50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
  
  
 0.404
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.