STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yloUHypothetical protein. (120 aa)    
Predicted Functional Partners:
yloV
Putative dihydroxyacetone/glyceraldehyde k inase.
 
  
 0.980
ylxM
Putative DNA-binding protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
     0.657
AEB30710.1
DegV domain-containing protein.
 
    0.611
yviA
Hypothetical protein.
 
    0.579
yitS2
UPF0230 protein.
 
    0.574
yitS1
DegV domain-containing protein.
 
    0.570
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.563
AEB30819.1
degV family protein.
 
    0.529
whiA
Putative morphogen; Involved in cell division and chromosome segregation.
  
     0.510
yrzL
Hypothetical protein; Belongs to the UPF0297 family.
  
  
 0.510
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.