ypzK protein (Carnobacterium sp. 174) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ypzK

Putative acetyltransferase. (135 aa)

Predicted Functional Partners:

scpA

0.820

scpB

0.820

rluB

0.787

ypbB

0.752

yerH

0.742

walH

0.723

lysA

0.717

yslB

0.697

AEB29273.1

0.636

yycH

0.623

Your Current Organism:

Carnobacterium sp. 174

NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEB29273.1	walH	CAR_c05760	CAR_c00260	Dithiol-disulfide isomerase.	Regulator of WalKR.	0.554
AEB29273.1	yerH	CAR_c05760	CAR_c16390	Dithiol-disulfide isomerase.	Putative lipoprotein.	0.441
AEB29273.1	ypzK	CAR_c05760	CAR_c10170	Dithiol-disulfide isomerase.	Putative acetyltransferase.	0.636
AEB29273.1	yycH	CAR_c05760	CAR_c00270	Dithiol-disulfide isomerase.	Regulator of YycFG.	0.431
lysA	rluB	CAR_c10160	CAR_c10200	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.666
lysA	scpA	CAR_c10160	CAR_c10180	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	0.694
lysA	scpB	CAR_c10160	CAR_c10190	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.692
lysA	ypzK	CAR_c10160	CAR_c10170	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Putative acetyltransferase.	0.717
rluB	lysA	CAR_c10200	CAR_c10160	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.666
rluB	scpA	CAR_c10200	CAR_c10180	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	0.841
rluB	scpB	CAR_c10200	CAR_c10190	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.910
rluB	ypzK	CAR_c10200	CAR_c10170	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	Putative acetyltransferase.	0.787
scpA	lysA	CAR_c10180	CAR_c10160	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.694
scpA	rluB	CAR_c10180	CAR_c10200	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.841
scpA	scpB	CAR_c10180	CAR_c10190	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.999
scpA	ypzK	CAR_c10180	CAR_c10170	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	Putative acetyltransferase.	0.820
scpB	lysA	CAR_c10190	CAR_c10160	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.692
scpB	rluB	CAR_c10190	CAR_c10200	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.	0.910
scpB	scpA	CAR_c10190	CAR_c10180	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.	0.999
scpB	ypzK	CAR_c10190	CAR_c10170	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	Putative acetyltransferase.	0.820