STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30019.1Hypothetical membrane protein. (929 aa)    
Predicted Functional Partners:
yisX
Hypothetical protein.
       0.788
mnaA1
Putative teichoic acid/polysaccharide glycosyl transferase, family 2.
 
  
 0.632
ywcD
Putative integral inner membrane protein.
 
  
 0.619
AEB29965.1
Putative nucleoside pyrophosphatase.
  
     0.591
ykcC
Putative glycosyltransferase.
 
  
 0.569
pbpA
Transpeptidase; Penicillin-binding protein 2A.
       0.522
AEB30390.1
Hypothetical protein.
  
     0.516
AEB29556.1
Hypothetical protein.
  
     0.467
AEB29296.1
Putative metal-dependent phosphohydrolase.
  
     0.460
ykuJ
Hypothetical protein.
  
     0.439
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.