STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dexBGlucan 1,6-alpha-glucosidase. (546 aa)    
Predicted Functional Partners:
pgmB1
Beta-phosphoglucomutase.
  
  
 0.806
yvdJ
Putative component of transporter.
  
    0.615
yvdK
Maltose phosphorylase.
  
  
 0.602
scrA
Sucrose-specific phosphotransferase system, enzyme IIBCA.
  
  
 0.586
bglP1
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.586
ptsG1
PTS system glucose-specific EIICBA component.
  
  
 0.586
bglP3
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.586
mdxG
Maltodextrin ABC transporter; Permease.
  
  
 0.554
mdxE1
Maltodextrin-binding protein MdxE.
  
  
 0.542
treB
PTS system trehalose-specific EIIBC component.
 
  
 0.542
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.