STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsLPutative phosphotransferase involved in extracellular matrix synthesis. (240 aa)    
Predicted Functional Partners:
epsN
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.980
tagA
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-alpha-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.952
epsC
Putative UDP-sugar epimerase.
 
  
 0.903
ptkA
Protein tyrosine kinase.
 
  
 0.892
AEB30209.1
Putative polysaccharide biosynthesis protein, chain length determination.
 
  
 0.878
AEB30091.1
Putative teichoic acid/polysaccharide export protein.
 
  
 0.859
epsD
Putative extracellular matrix biosynthesis enzyme.
 
  
 0.839
ywqC1
Putative capsular polysaccharide biosynthesis protein YwqC.
 
  
 0.800
tuaB
Colanic acid exporter.
 
  
 0.798
cysS
cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.796
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.