STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30099.1GCN5-like N-acetyltransferase. (322 aa)    
Predicted Functional Partners:
AEB30094.1
Hypothetical protein.
 
     0.723
epsN
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.689
AEB30098.1
Hypothetical protein.
 
     0.688
epsL
Putative phosphotransferase involved in extracellular matrix synthesis.
 
     0.571
AEB30728.1
Ser/Thr protein phosphatase family protein.
  
     0.515
pdaA
Putative polysaccharide deacetylase.
     
 0.514
AEB30250.1
Putative trans-acting regulator.
  
    0.503
epsC
Putative UDP-sugar epimerase.
 
     0.494
AEB29233.1
Hypothetical protein.
  
     0.449
AEB29186.1
Hypothetical protein.
  
     0.447
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.