STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30102.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
srlE
Glucitol/sorbitol-specific phosphotransferase enzyme IIB component.
 
 
 0.997
srlA
Glucitol/sorbitol permease IIC component.
 
 
 0.997
sorD
Sorbitol-6-phosphate 2-dehydrogenase.
 
 
  0.987
AEB30105.1
Hypothetical protein.
 
  
 0.972
AEB30377.1
Glucitol/sorbitol phosphotransferase system, enzyme IIA.
  
  
  0.967
AEB30106.1
Hypothetical protein.
 
    0.907
ptsH
Phosphocarrier protein HPr.
    
  0.906
ywjH
Translaldolase.
 
     0.782
AEB30814.1
Hypothetical protein.
 
     0.481
AEB30100.1
Hypothetical protein.
 
     0.470
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.