STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30113.1Protein of unknown function DUF871. (369 aa)    
Predicted Functional Partners:
ybbF
Putative sugar phosphotransferase enzyme II.
 
     0.942
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.929
ybbH1
Putative transcriptional regulator.
 
     0.694
AEB30862.1
Putative PTS system, IIB component.
 
    0.508
gpm2
Phosphoglycerate mutase.
       0.425
ybbH2
Uncharacterized HTH-type transcriptional regulator YbbH.
 
     0.416
AEB30165.1
Putative N-acetyl transferase, GNAT family.
 
    0.404
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component.
 
    0.400
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.