STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqEProtein tyrosine-phosphatase. (264 aa)    
Predicted Functional Partners:
AEB30209.1
Putative polysaccharide biosynthesis protein, chain length determination.
  
 0.904
ptkA
Protein tyrosine kinase.
  
 0.900
ywqC2
Modulator of YwqD protein tyrosine kinase activity.
 
 
 0.895
ywqC1
Putative capsular polysaccharide biosynthesis protein YwqC.
 
 
 0.894
epsL
Putative phosphotransferase involved in extracellular matrix synthesis.
 
  
 0.548
glpF
Glycerol facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.448
glpO2
Glycerol-3-phosphate oxidase.
       0.448
AEB30091.1
Putative teichoic acid/polysaccharide export protein.
 
   
 0.432
glpK3
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.430
AEB30208.1
Putative priming glycosyl transferase.
 
  
 0.423
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.