STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30209.1Putative polysaccharide biosynthesis protein, chain length determination. (234 aa)    
Predicted Functional Partners:
ywqC2
Modulator of YwqD protein tyrosine kinase activity.
 
 0.992
ywqC1
Putative capsular polysaccharide biosynthesis protein YwqC.
 
 0.971
ywqE
Protein tyrosine-phosphatase.
  
 0.904
epsL
Putative phosphotransferase involved in extracellular matrix synthesis.
 
  
 0.878
AEB30208.1
Putative priming glycosyl transferase.
 
  
 0.872
AEB30196.1
Hypothetical protein.
 
  
 0.700
tuaA
Teichuronic acid biosynthesis protein; RBL00298.
 
  
 0.642
epsC
Putative UDP-sugar epimerase.
 
  
 0.614
tuaD
UDP-glucose 6-dehydrogenase.
     
 0.548
galF2
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.542
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.