STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsFPutative glycosyltransferase involved in extracellular matrix formation. (252 aa)    
Predicted Functional Partners:
AEB30220.1
Hypothetical protein.
 
     0.928
epsG
Biofilm extracellular matrix formation enzyme.
 
  
 0.772
tuaA
Teichuronic acid biosynthesis protein; RBL00298.
 
  
 0.742
AEB30219.1
Hypothetical protein.
       0.730
epsH2
Putative glycosyltransferase EpsH.
 
  
 0.728
epsL
Putative phosphotransferase involved in extracellular matrix synthesis.
 
  
 0.631
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.594
mnaA2
UDP-N-acetylmannosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.584
AEB30217.1
Glycosyltransferase.
  
  
 0.582
tuaB
Colanic acid exporter.
 
  
 0.582
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.