STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepSPutative transcriptional regulator, TetR family. (185 aa)    
Predicted Functional Partners:
yvlB
Hypothetical protein.
  
     0.606
yvaM
Putative hydrolase.
 
  
 0.550
AEB30330.1
Protein of unknown function DUF214.
  
  
 0.546
liaF
Integral inner membrane protein.
  
     0.529
AEB29466.1
Hypothetical protein.
  
     0.516
AEB29463.1
Hypothetical protein.
  
     0.491
AEB29818.1
Hypothetical protein.
  
     0.482
AEB30320.1
Hypothetical signaling protein.
   
 
 0.479
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.467
AEB29340.1
Hypothetical membrane protein.
  
     0.461
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.