STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytGExoglucosaminidase. (212 aa)    
Predicted Functional Partners:
flgE
Flagellar basal body rod protein FlgG.
 
  
 0.788
ylxG
Putative flagellar hook assembly protein.
  
  
 0.758
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.758
flgK
Flagellar hook-associated protein FlgK.
  
  
 0.758
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.757
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.737
yodJ
D-alanyl-D-alanine carboxypeptidase lipoprotein.
     
 0.732
flgG
Flagellar basal-body rod protein FlgG.
 
  
 0.696
flhO
Putative flagellar basal-body rod protein.
 
  
 0.686
pdaA
Putative polysaccharide deacetylase.
 
  
 0.662
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.