Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acuBComponent of the acetoin degradation regulation pathway. (219 aa)    
Predicted Functional Partners:
braE
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.920
livG
High-affinity branched-chain amino acid transport ATP-binding protein LivG; LIV-I protein G.
 
     0.919
braD
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.905
braG
High-affinity branched-chain amino acid transport ATP-binding protein.
 
     0.903
braC
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
     0.822
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.631
AEB30321.1
Glycosyl transferase family 2.
       0.450
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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