STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30350.1Hypothetical extracellular peptide precursor. (67 aa)    
Predicted Functional Partners:
mbl
Rod shape-determining protein Mbl.
       0.713
ypiB
Hypothetical protein; Belongs to the UPF0302 family.
  
     0.653
AEB31028.1
Hypothetical protein.
  
     0.592
AEB29253.1
Hypothetical protein.
  
     0.553
AEB28772.1
Hypothetical protein.
  
     0.530
yoeD
Putative excisionase.
 
     0.518
AEB30716.1
RimK domain protein ATP-grasp.
 
     0.512
ftsL
Cell-division protein; Essential cell division protein; Belongs to the FtsL family.
  
     0.501
yxkF
Putative transcriptional regulator.
  
     0.482
yrrS
Hypothetical protein.
  
     0.479
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.