STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwlO2Peptidoglycan DL-endopeptidase CwlO. (501 aa)    
Predicted Functional Partners:
AEB30347.1
Protein yocH precursor.
 
  
 0.823
ftsX
Cell-division ABC transporter; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.775
fliY
Flagellar motor switching and energizing phosphatase.
   
   0.747
ftsE1
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.683
yrvJ
N-acetylmuramoyl-L-alanine amidase, family 3.
 
  
 0.651
cwlO1
Secreted cell wall DL-endopeptidase.
 
  
0.650
AEB29337.1
NLP/P60-domain protein.
 
  
0.647
yocH
Putative exported cell wall-binding protein.
 
  
 0.645
ponA
Peptidoglycan glycosyltransferase; Penicillin-binding proteins 1A and 1B.
 
   
 0.635
ftsE2
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.627
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.