STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pucRTranscriptional regulator of the purine degradation operon. (542 aa)    
Predicted Functional Partners:
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
   
 0.859
yybO
Putative permease.
 
     0.844
yurH
Allantoate amidohydrolase.
 
   
 0.822
pucG
Ureidoglycolate lyase (ureidoglycolase).
 
     0.789
AEB30429.1
Conserved hypothetical protein.
 
     0.786
AEB30435.1
Hypothetical protein.
 
     0.771
AEB30430.1
Hypothetical ylbE protein.
 
     0.769
sucD
succinate--CoA ligase (ADP-forming) subunit alpha.
 
     0.769
ylbA
Protein YlbA.
 
     0.764
AEB28802.1
Hypothetical protein.
 
     0.745
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.