STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrhKHypothetical protein. (143 aa)    
Predicted Functional Partners:
AEB30179.1
Hypothetical protein.
  
     0.732
AEB31028.1
Hypothetical protein.
  
     0.680
ycbP
Putative inner integral membrane protein.
  
     0.651
fliJ
Flagellar export protein FliJ.
  
     0.650
AEB28773.1
Hypothetical protein, DUF948 family of general stress response.
 
     0.645
AEB29488.1
Hypothetical protein.
  
     0.643
AEB29900.1
Hypothetical protein.
  
     0.609
AEB30098.1
Hypothetical protein.
 
     0.601
AEB28772.1
Hypothetical protein.
  
     0.595
AEB30169.1
Conserved hypothetical protein.
  
     0.583
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.