STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yckBPutative ABC transporter; Binding lipoprotein; Belongs to the bacterial solute-binding protein 3 family. (302 aa)    
Predicted Functional Partners:
yckA
Putative ABC transporter; Permease.
 0.996
tcyB
Cystine ABC transporter; Permease.
 0.970
artR
High affinity arginine ABC transporter; ATP-binding protein.
 
 0.958
yxeM
Putative ABC transporter; Binding lipoprotein.
  
  
 
0.925
glnQ1
Glutamine transport ATP-binding protein GlnQ.
 
 0.913
AEB29543.1
Putative amino acid ABC transporter, membrane-spanning subunit.
 
 0.735
glnP1
Glutamine transport system permease protein GlnP.
 
 0.720
glnM1
Glutamine ABC transporter permease protein GlnM.
 
 0.693
glnM2
Glutamine ABC transporter permease protein GlnM.
 
 0.675
glnP2
Glutamine transport system permease protein GlnP.
 
 0.673
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.