STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yknVPutative ABC transporter; ATP-binding protein. (593 aa)    
Predicted Functional Partners:
pstBA
Phosphate ABC transporter; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.887
pstB2
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.854
yknU
Putative ABC transporter; ATP-binding protein.
 
    
0.851
yfiB
Uncharacterized ABC transporter ATP-binding protein YfiB.
 
  
0.498
AEB29509.1
ABC transporter, ATP-binding protein.
 
  
0.495
AEB30374.1
Putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit.
 
  
0.483
AEB29575.1
Putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit.
 
  
0.476
malQ
Maltose and maltodextrin ABC transporter subunit; ATP-binding protein.
 
  
0.465
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.453
AEB30554.1
acyl-ACP thioesterase.
       0.428
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.