Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
motBFlagellar motor protein MotB. (249 aa)    
Predicted Functional Partners:
motA
Flagellar motor protein MotA.
 
 0.999
motP
Flagellar motor protein MotP.
 
 0.997
AEB29725.1
Hypothetical protein.
  
  
 0.955
fliS
Flagellar protein FliS.
 
  
 0.924
ytxE
Uncharacterized protein YtxE.
  
  
 
0.923
flgK
Flagellar hook-associated protein FlgK.
 
  
 0.923
fliG
Flagellar motor switch protein FliG.
 
  
 0.921
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.915
fliY
Flagellar motor switching and energizing phosphatase.
 
  
 0.900
cheA
Chemotactic two-component sensor histidine kinase.
 
  
 0.899
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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