STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtNDehydrosqualene desaturase. (503 aa)    
Predicted Functional Partners:
crtM
Dehydrosqualene synthase.
 
 
 0.998
crtQ
4,4'-diaponeurosporenoate glycosyltransferase.
 
   
 0.805
crtO
Glycosyl-4,4'-diaponeurosporenoate acyltransferase.
 
   
 0.785
AEB30582.1
Transcriptional regulatory protein.
     
 0.660
ywdH
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.638
crtP
4,4'-diaponeurosporene oxidase.
 
    
0.601
AEB30583.1
Putative ABC exporter, ATP-binding subunit.
  
    0.556
AEB30584.1
Putative ABC exporter, membrane-spanning/permease subunit.
       0.519
AEB29626.1
Conserved hypothetical protein.
 
     0.402
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.