STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntKGluconate kinase; Belongs to the FGGY kinase family. (516 aa)    
Predicted Functional Partners:
yqeC
6-phosphogluconate dehydrogenase-like protein.
 
 
 0.949
yqjI
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 
 0.920
ykgB
6-phosphogluconolactonase.
    
 0.908
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.752
AEB30590.1
Hypothetical protein.
       0.648
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
  
 0.645
yvcT
Putative 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.615
idnO
Gluconate 5-dehydrogenase.
  
 
 0.544
gntP
Gluconate permease.
  
  
 0.522
malP
Phosphotransferase system (PTS) maltose-specific enzyme IICB component.
  
  
 0.506
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.