Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB30594.1Lipolytic protein G-D-S-L family. (212 aa)    
Predicted Functional Partners:
AEB30593.1
Transcriptional regulatory protein.
 
    0.735
AEB30116.1
Putative esterase.
 
   
 0.697
iolE
Myo-inositol catabolism protein.
  
     0.503
ylbC
Hypothetical protein.
  
  
 0.464
malP
Phosphotransferase system (PTS) maltose-specific enzyme IICB component.
       0.449
yqhL
Putative sulfur transferase.
     
 0.424
AEB30788.1
Hypothetical protein.
 
     0.405
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.403
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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