Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yqiRPutative sigma L-dependent transcriptional regulator. (899 aa)    
Predicted Functional Partners:
sigL
RNA polymerase sigma-54 factor; sigma-L.
 
 
 
 0.919
licB
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component.
 
     0.773
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component.
 
   
 0.751
levE1
Fructose-specific phosphotransferase enzyme IIB component.
  
  
 0.742
gmuR2
HTH-type transcriptional regulator GmuR; GntR family.
       0.664
AEB30862.1
Putative PTS system, IIB component.
 
     0.648
gmuC1
Oligo-alpha-mannoside phosphotransferase system enzyme IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.615
AEB30163.1
Hypothetical protein.
 
   
 0.540
licR2
licABCH operon regulator.
 
   
 0.510
AEB30167.1
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.507
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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