STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cycBCyclodextrin-binding lipoprotein. (427 aa)    
Predicted Functional Partners:
ganQ
Arabinogalactan oligomer permease.
 
 0.997
mdxG
Maltodextrin ABC transporter; Permease.
 
 0.995
ganP
Arabinogalactan oligomer permease.
 0.992
mdxF
Maltodextrin ABC transport system; Permease.
 0.982
msmX
Multiple sugar-binding transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.954
fbpC
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
  
 0.944
mdxE1
Maltodextrin-binding protein MdxE.
  
  
 
0.916
mdxE2
Maltodextrin-binding protein MdxE.
  
  
 
0.916
yvdJ
Putative component of transporter.
 
  
 0.748
nplT
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.728
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.