Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ganRTranscriptional regulator; LacI family. (332 aa)    
Predicted Functional Partners:
scrR2
Sucrose operon repressor.
 
     0.853
yhjM
Transcriptional regulator of the ntd operon; LacI family.
  
     0.760
rbsR
Transcriptional regulator; LacI family.
  
     0.759
exuR
Transcriptional regulator; LacI family.
  
     0.755
araR2
Arabinose metabolism transcriptional repressor.
  
     0.716
ptsH
Phosphocarrier protein HPr.
   
 
 0.608
cycB
Cyclodextrin-binding lipoprotein.
 
  
 0.557
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.521
sacK
Fructokinase.
  
  
 0.444
gmuR2
HTH-type transcriptional regulator GmuR; GntR family.
 
   
 0.434
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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