STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30647.1Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
ylxG
Putative flagellar hook assembly protein.
 
    0.924
AEB30649.1
Unknown conserved protein.
  
    0.871
flgE
Flagellar basal body rod protein FlgG.
  
    0.858
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
    0.789
fliJ
Flagellar export protein FliJ.
 
    0.765
cheC
Chemotaxis protein CheC; Signal terminating phosphatase of CheR-mediated methylation of methyl-accepting chemotaxis proteins (MCPs).
 
     0.764
ylzI
Putative flagellar protein.
 
     0.745
fliH
Flagellar assembly protein FliH.
 
    0.743
fliG
Flagellar motor switch protein FliG.
 
    0.735
cheD
Probable chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
     0.732
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.