STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ysnFPutative stress response protein. (308 aa)    
Predicted Functional Partners:
AEB30394.1
Hypothetical protein.
  
     0.537
opuCC
Glycine betaine/carnitine/choline-binding protein.
 
    0.530
ygxB
Putative integral inner membrane protein.
 
    0.494
yvrD
Putative oxidoreductase.
  
    0.470
AEB30100.1
Hypothetical protein.
  
     0.466
yrhK
Hypothetical protein.
  
     0.454
camA
Putidaredoxin reductase.
  
    0.452
ydbT
Hypothetical protein.
  
    0.447
ydbD
Putative manganese-containing catalase.
  
    0.442
ydaT
Hypothetical protein.
 
    0.436
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.