STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30746.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
kdgK1
2-dehydro-3-deoxygluconokinase.
 
 0.979
AEB31013.1
PfkB domain protein.
 
 
 0.978
kdgK2
2-dehydro-3-deoxygluconokinase.
 
 0.972
glcD
Glycolate oxidase subunit.
   
 
 0.916
kdgA2
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase.
  
  
 
0.906
kdgA1
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase.
  
  
 
0.905
gapA
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.856
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.851
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.847
ptsG1
PTS system glucose-specific EIICBA component.
  
 
 0.842
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.