STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB30793.1Activator of Hsp90 ATPase 1 family protein. (137 aa)    
Predicted Functional Partners:
phnB1
Protein PhnB.
 
    0.683
phnB2
Protein PhnB.
 
     0.671
AEB28784.1
Putative rifampin ADP-ribosyl transferase.
 
     0.611
yjlB
Conserved hypothetical protein; cupin family.
       0.584
AEB29784.1
Hypothetical protein.
 
     0.510
dkgB
2,5-diketo-D-gluconic acid reductase B.
       0.496
ybfI
Putative transcriptional regulator; AraC/XylS family, cupin family.
  
    0.466
yrbE
Putative oxidoreductase.
  
    0.456
AEB30790.1
Inositol 2-dehydrogenase.
  
    0.417
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.