STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bgaCBeta-galactosidase. (589 aa)    
Predicted Functional Partners:
yoxA
Putative epimerase.
  
 
 0.934
ganA
Arabinogalactan type I oligomer exo-hydrolase; Beta-galactosidase, lactase.
 
  
  0.922
galM1
Aldose 1-epimerase.
  
 
 0.918
galM2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.918
agaS
Putative tagatose-6-phosphate ketose/aldose isomerase.
 
   
 0.825
levF2
PTS system, IIC component.
 
   
 0.813
levE2
Fructose-specific phosphotransferase enzyme IIB component.
 
   
 0.793
levG2
PTS system, IID component.
 
   
 0.785
AEB30828.1
PTS system, IIA component.
     
 0.723
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
 
   
 0.646
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.