STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araR2Arabinose metabolism transcriptional repressor. (363 aa)    
Predicted Functional Partners:
ganR
Transcriptional regulator; LacI family.
  
     0.716
exuR
Transcriptional regulator; LacI family.
  
     0.705
araB
L-ribulokinase.
 
 
 
 0.701
galR
Galactose operon transcriptional regulator, LacI family.
  
     0.682
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.661
AEB30859.1
Hypothetical protein.
       0.512
AEB30860.1
Hypothetical protein.
       0.512
araD
L-ribulose-5-phosphate 4-epimerase.
 
  
 0.487
araG
L-arabinose transport ATP-binding protein AraG.
  
  
 0.475
AEB30862.1
Putative PTS system, IIB component.
  
  
 0.429
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.