STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhqA4Putative ring-cleaving dioxygenase MhqA. (289 aa)    
Predicted Functional Partners:
AEB30903.1
Hypothetical protein.
 
    0.903
mhqD
Putative hydrolase MhqD.
    0.805
catE
Catechol-2,3-dioxygenase subunit.
 
  
 0.554
AEB30905.1
Hypothetical protein.
       0.536
ydgI
Putative dehydrogenase.
  
  
 0.519
ywrF
Hypothetical protein.
 
  
 0.510
AEB30902.1
Hypothetical protein.
       0.467
birA
Biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.427
yqiG2
Putative NADH-dependent flavin oxidoreductase YqiG.
  
 
 0.401
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.