STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yesNTwo-component response regulator. (543 aa)    
Predicted Functional Partners:
yesM
Two-component sensor histidine kinase.
 
 
 0.996
AEB30866.1
Transcriptional regulator, AraC family protein.
 
  
  0.913
AEB30773.1
Transcriptional regulator, AraC family.
    
 
0.900
cheA
Chemotactic two-component sensor histidine kinase.
  
 
 0.852
fliM
Flagellar motor switch protein FliM.
  
 
 0.842
mglB
D-galactose-binding periplasmic protein.
 
     0.717
AEB29725.1
Hypothetical protein.
  
 
 0.698
fliY
Flagellar motor switching and energizing phosphatase.
  
 
 0.658
mngB
Alpha-mannosidase MngB.
  
    0.638
mglC
Galactoside transport system permease protein MglC.
 
     0.488
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.