STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manRTranscriptional regulator ManR. (499 aa)    
Predicted Functional Partners:
AEB30975.1
Hypothetical protein.
 
    0.947
AEB30973.1
Hypothetical protein.
    0.866
frwB2
Fructose-like phosphotransferase enzyme IIB component 2.
 
    0.840
fruA2
PTS system fructose-specific EIIBC component.
 
    0.833
alsE
D-allulose-6-phosphate 3-epimerase.
 
    0.801
frwB1
Fructose-like phosphotransferase enzyme IIB component 2.
 
    0.750
mtlR2
Transcriptional regulator MtlR.
 
    0.580
ulaA2
Ascorbate-specific permease IIC component UlaA.
 
   
 0.573
AEB30814.1
Hypothetical protein.
 
  
 0.573
ulaA1
Ascorbate-specific permease IIC component UlaA.
 
   
 0.547
Your Current Organism:
Carnobacterium sp. 174
NCBI taxonomy Id: 208596
Other names: C. sp. 17-4, Carnobacterium sp. 17-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.